Making Downloads
Download RNA Baser Sequence Assembler and other free biology tools
An affordable alternative to the really expensive software for DNA assembly and alignment.
sequence assembly
Description
RNA Baser Sequence Assembler is easy to use software for RNA sequence assembly, RNA sequence analysis, contig editing, metadata integration and mutation detection.
Instant download
While other similar products force you to provide your personal data so they can track you down, send you spam or make promotional phone calls, we offer you instant and unconditioned access to the download link.
Fully functional trial
Trial version is functional. RNA Baser Sequence Assembler is the only software on the market that allows you to save your work while you are in the trial period.
Even after the trial period ends, you can still use RNA Baser's internal tools to edit and view chromatogram files, cut primers, to assemble contigs, reverse complement sequences, etc, but you won't be able to save the contig. If the trial period was not enough for you, you can ask a (free) trial extension key.
Download link
Note: Starting with January 2010, all functions available in RNA Baser have been integrated in DNA Baser also. We recommend you to download DNA Baser instead of RNA Baser.
Free download RNA sequence assembly software. Metadata integration
RNA Baser v2.77
License
Full working trial
Package size
~ 3.11 MB (Installer)
Download time
<10 seconds (for DSL)
download
Other downloads
rRNA contextual data - Storage template file
DNA Baser Sequence Assembler
DNA Chromatogram Explorer
multi-FASTA to Fasta Converter
Fasta to multi-FASTA Converter
Grid Cell Counter
ABI to FASTA Converter
DNA Nucleotide Counter
Related links
About contextual metadata
Metadata integration workflow
Ribocon GmbH - Genome analysis Opens in a new window
MIENS
ARB-Silva Opens in a new window
MIGS/MIMS Opens in a new window
FAQ
Price list
For details please visit this page.
Portability
One of the many features that makes RNA Baser Sequence Assembler unique is its size and portability. RNA Baser is very small so you can easily copy it on a USB flash stick or floppy disk and take it with you.
Unique DNA alignment, contig editign, molecular biology software, etc
RNA Baser Sequence Assembler official web siteRNA Baser sequence assembler-Order nowRNA Baser sequence assembler-Download full working versionDNA Baser Assembler is unique and revolutionary bioinformatics software for manual and automatic DNA Sequence alignment, DNA sequence analysis, automatic sample processing, contig editing, metadata integration, file format conversion and mutation detection
chromatogram assembly
abi trace assembly
RNA Sequence alignment and RNA sequence metadata integration software
RNA Baser Sequence Aligner
Easy contextual metadata integration
RNA Baser Sequence Aligner represents an extension of DNA Baser Sequence Aligner, specialized in processing rRNA sequences. It is optimized for early integration of contextual metadata. This way, the metadata will stay attached to the primary sequence information throughout the complete workflow of sequence analysis, until final submission. In addition, RNA Baser Sequence Aligner is optimized for data exchange with standard non-commercial software used for rRNA sequence analysis and submission.
This is a joint project of HeracleSoftware, Ribocon GmbH and Max Planck Institute for Marine Microbiology in Bremen, Germany
How are we helping you to analyze your rRNA sequences faster?
1. RNA Baser Sequence Aligner is performing for you all the tedious steps in Sequence alignment:
Automatic bad end trimming
Automatic ambiguous bases correction - More than 98% of ambiguities/mismatches are automatically corrected by RNA Baser without any user input.
Automatic vector removal
2. State of art graphic user interface designed with one purpose in mind: to minimize the user input:
Access with one single look to all needed data
None of the necessary functions are far than two mouse clicks
Synchronized display of the contig map, contig alignment and chromatograms.
Fast navigation between one ambiguous bases
3. Assemble thousands of DNA/RNA sample files in minutes at batch
Additionally to the classic single contig assembly mode, RNA Baser offers the possibility to assemble thousands of contigs (clone libraries) in batch mode with a single mouse click.
4. Fast integration of metadata in the sequence information
Keep sequence and environmental parameters information together; in this way, you will always know were your sequence is coming from
Fast submission to the databases of all relevant data
With RNA Baser , you can:
Assemble or align to a reference sequence
Batch assemble or align in groups of sequences by name
Automatically end clip
Automatically trim vector sequences
Import sequences from ABI, SCF, FASTA and SEQ
View and edit sequence traces
Mark specific regions (like discrepancies, low-quality areas in chromatograms) with visible colors and quickly navigate to these regions
Convert between different file formats (ABI,SCF, FASTA, multi-Fasta...)
other features
RNA Baser price
The package is offered at a very affordable price, making it ideal for universities, research institutions, or private companies performing DNA sequencing. Discounts apply if you purchase more than one license.
ARB Silva
ARB Silva Opens in a new window is a comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data, free for academic use. SILVA provides comprehensive, quality checked and regularly updated databases of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences for all three domains of life (Bacteria, Archaea and Eukarya).
How to assemble a contig in 5 seconds
How to make a contig in 5 seconds
(click to enlarge)
TheScientist.info
Today, all relevant information is shared over internet. If people cannot find you in Google, you do not exist. Owning a web site allows you to keep your profile (research, 'for hire' availability, CV, contact) updated. TheScientist.info offers free dedicated web sites for scientists.
Useful options
Beautiful snippets
Amazing pages
Outstanding images
Grow with Us
Put your people at the heart of your marketing with tools that help you get to know your audience
and see who you should be talking to.
Beginner
$ 35 .00
/ month- Basic sales & marketing for up to 2 users
- Account & Sales management
- No customization
- No support
Professional
$ 65 .00
/ month- Complete CRM for any size team
- Access to all modules
- Limited customization
- Email support
Expert
$ 125 .00
/ month- Unlimited CRM power and support
- Access to all modules and features
- Unlimited customization
- 24/7 support