 |
How are we helping you to analyze your rRNA sequences faster?
1. RNA Baser Sequence Aligner is performing for you all the tedious steps in Sequence alignment:
- Automatic bad end trimming
- Automatic ambiguous bases correction - More than 98% of ambiguities/mismatches are automatically corrected by RNA Baser without any user input.
- Automatic vector removal
2. State of art graphic user interface designed with one purpose in mind: to minimize the user input:
- Access with one single look to all needed data
- None of the necessary functions are far than two mouse clicks
- Synchronized display of the contig map, contig alignment and chromatograms.
- Fast navigation between one ambiguous bases
3. Assemble thousands of DNA/RNA sample files in minutes at batch
- Additionally to the classic single contig assembly mode, RNA Baser offers the possibility to assemble thousands of contigs (clone libraries) in batch
mode with a single mouse click.
4. Fast integration of metadata in the sequence information
- Keep sequence and environmental parameters information together; in this way, you will always know were your sequence is coming from
- Fast submission to the databases of all relevant data
With RNA Baser , you can:
- Assemble or align to a reference sequence
- Batch assemble or align in groups of sequences by name
- Automatically end clip
- Automatically trim vector sequences
- Import sequences from ABI, SCF, FASTA and SEQ
- View and edit sequence traces
- Mark specific regions (like discrepancies, low-quality areas in chromatograms) with visible colors and quickly navigate to these regions
- Convert between different file formats (ABI,SCF, FASTA, multi-Fasta...)
- other features
RNA Baser price
The package is offered at a very affordable price, making it ideal for universities, research institutions, or private companies performing DNA sequencing. Discounts apply if you purchase more than one license.
ARB Silva
ARB Silva  is a comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data, free for academic use. SILVA provides comprehensive, quality checked and regularly updated databases of aligned small (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences
for all three domains of life (Bacteria, Archaea and Eukarya).
|
How to
assemble a contig in 5 seconds
(click to enlarge)
|
TheScientist.info
Today, all relevant information is shared over internet. If people cannot find you in Google, you do not exist. Owning a web site allows you to keep your profile (research, 'for hire' availability, CV, contact) updated. TheScientist.info offers free dedicated web sites for scientists.
|
